Package: ospsuite.reportingframework 1.0.1
ospsuite.reportingframework: Provides a framework for report generation with the ospsuite
The OSP Suite Reporting Framework, which is based on the esqlabsR package, is a robust tool designed to systematically define simulation scenarios, their inputs and outputs, and standardize data import and matching processes. These functionalities allow for easy and automatable model execution and plot generation, ultimately facilitating the generation of customizable reports for OSP physiologically-based pharmacokinetic (PBPK) models. As a result, this framework significantly enhances reporting efficiency, enabling researchers to create clear, tailored reports that effectively communicate complex modeling results.
Authors:
ospsuite.reportingframework_1.0.1.tar.gz
ospsuite.reportingframework_1.0.1.zip(r-4.7)ospsuite.reportingframework_1.0.1.zip(r-4.6)ospsuite.reportingframework_1.0.1.zip(r-4.5)
ospsuite.reportingframework_1.0.1.tgz(r-4.6-any)ospsuite.reportingframework_1.0.1.tgz(r-4.5-any)
ospsuite.reportingframework_1.0.1.tar.gz(r-4.7-any)ospsuite.reportingframework_1.0.1.tar.gz(r-4.6-any)
manual.pdf |manual.html✨
DESCRIPTION |NEWS
card.svg |card.png
ospsuite.reportingframework/json (API)
| # Install 'ospsuite.reportingframework' in R: |
| install.packages('ospsuite.reportingframework', repos = c('https://open-systems-pharmacology.r-universe.dev', 'https://cloud.r-project.org')) |
Bug tracker:https://github.com/open-systems-pharmacology/ospsuite.reportingframework/issues
Pkgdown/docs site:https://www.open-systems-pharmacology.org
Last updated from:d5b92de0e9 (on v1.0.1). Checks:8 ERROR, 1 FAIL. Indexed: yes.
| Target | Result | Time | Files | Syslog |
|---|---|---|---|---|
| linux-devel-x86_64 | ERROR | 283 | ||
| source / vignettes | ERROR | 500 | ||
| linux-release-x86_64 | ERROR | 324 | ||
| macos-release-arm64 | ERROR | 222 | ||
| macos-oldrel-arm64 | ERROR | 205 | ||
| windows-devel | ERROR | 230 | ||
| windows-release | ERROR | 306 | ||
| windows-oldrel | ERROR | 275 | ||
| wasm-release | FAIL | 370 |
Exports:addBiometricsToConfigaddDefaultConfigForDistributionsVsDemographicsaddDefaultConfigForHistogramsaddDefaultConfigForPKBoxwhsikerPlotsaddDefaultConfigForPKForestPlotsaddDefaultConfigForTimeProfilePlotsaddFiguresAndTablesaddMessageToLogaddPredictedValuesaddSensitivityTableaggregateObservedDataGroupsBIOMETRICUNITScalculatePKParameterForScenarioscaptureLogconvertDataCombinedToDataTableconvertDataTableToDataCombinedcreateDocumentFromTemplatecreateProjectConfigurationcreateScenarios.wrappedcreateWorkflowTemplateDATACLASSEXPORTDIRexportRandomPopulationsexportSimulationWorkflowToEPackageexportTLFWorkflowToEPackageexportVirtualTwinPopulationsformatPercentilesgetDataGroupsgetModelParameterDefinitionsgetOutputPathIdsgetQCpassedEnvironmentVariablegetScenarioDefinitionsgetTimeRangeTagsimportWorkflowinitLogfunctioninitProjectloadConfigTableEnvironmentloadPKParameterloadScenarioResultsToFrameworkmdBulletmdBullet0mdCaptionmdFiguremdHeadingmdLinkmdNewlinemdNewpagemdPastemdPaste0mdTablemergeRmdsopenEPackageTemplateopenFigureTemplateopenWorkflowTemplateospsuite_plotPredictedVsObservedospsuite_plotQuantileQuantilePlotospsuite_plotResidualsAsHistogramospsuite_plotResidualsVsObservedospsuite_plotResidualsVsTimeospsuite_plotTimeProfileplotDistributionVsDemographicsplotHistogramsplotPKBoxwhiskerplotPKForestAggregatedAbsoluteValuesplotPKForestAggregatedRatiosplotPKForestPointEstimateOfAbsoluteValuesplotPKForestPointEstimateOfRatiosplotSensitivityplotTimeProfilesProjectConfigurationRFreadObservedDataByDictionaryrenderWordrunAndSaveScenariosrunOrLoadScenariosrunPlotrunSensitivityAnalysisForScenariossaveSessionInfosetExportAttributessetHeadersToLowerCasesetShowLogMessagessetupVirtualTwinPopConfigsetWorkflowOptionssplitInputsTestProjectBuilderTIMERANGEupdateDataGroupIdupdateOutputPathIdvalidateAtleastOneEntryvalidateConfigTablePlotsvalidateDistributionVsDemographicsConfigvalidateGroupConsistencyvalidateHeadersvalidateHistogramsConfigvalidateNumericVectorColumnsvalidateObservedDatavalidatePKBoxwhiskerConfigvalidatePKForestAggregatedAbsoluteValuesConfigvalidatePKForestAggregatedRatiosConfigvalidatePKForestPointEstimateOfAbsoluteValuesConfigvalidatePKForestPointEstimateOfRatiosConfigvalidateSensitivityConfigvalidateTimeProfilesConfigwriteTableToLogwriteToLogxlsxAddDataUsingTemplatexlsxAddSheetxlsxCloneAndSetxlsxReadDataxlsxWriteData
Dependencies:backportsbase64encbitbit64bootbslibcachemcheckmateclicliprcodetoolscommonmarkcowplotcpp11crayoncurldata.tabledigestdoParalleldplyresqlabsRevaluatefarverfastmapfitdistrplusfontawesomeforeachfsgenericsggh4xggnewscaleggplot2ggsciggtextgluegridtextgtablehighrhmshtmltoolsisobanditeratorsjpegjquerylibjsonliteknitrlabelinglatticelifecyclelitedownloggermagrittrmarkdownMASSMatrixmemoisemimeopenxlsxospsuiteospsuite.plotsospsuite.utilspatchworkpillarpkgconfigpngprettyunitsprogresspurrrR6rappdirsRColorBrewerRcppreadrrlangrmarkdownrSharpS7sassscalesstringistringrsurvivaltibbletidyrtidyselecttinytextlftzdbutf8vctrsviridisLitevroomwithrxfunxml2yamlzip
